You know the corollary to Arthur C Clarke's "Any sufficiently advanced technology is indistinguishable from magic," which is "Any sufficiently analyzed magic is indistinguishable from technology"? That's what I think the explanation and manipulation of the electromagnetic force and strong and weak nuclear forces basically are. We just figured out the rules for how magic works, and now we manipulate them to make rocks think and show us pretty colors over vast distances, and can also explode cities with glowing rocks and weird gasses. Also we can make potent potions from strange biological and chemical essences that make the body do what we tell it, mostly. And we're getting better at it (and would be getting better at it faster if it weren't for metaphorical dragons getting in the way).
Just because we can explain it doesn't make it any less magic.